| yelp | | Haruka UMEMURA | 2017 | 5 Min. | Nippon Animation | 2017 |
| Yellow Elephant | きいろいゾウ | Ryuichi HIROKI | 2013 | 132 Min. | Nippon Cinema | 2013 |
| Yasukuni | 靖国神社 | Ying LI | 2007 | 123 Min. | Nippon Retro | 2012, 2008 |
| Yariman | 薔薇 ／ や・り・ま・ん | Rei SAKAMOTO | 2008 | 65 Min. | Nippon Cinema | 2009 |
| Yan | 燕 Yan | Keisuke IMAMURA | 2019 | 86 Min. | Nippon Visions | 2020 |
| Yamato (California) | 大和（カリフォルニア） | Daisuke MIYAZAKI | 2016 | 119 Min. | Nippon Visions | 2017 |
| Yakuza's Magnificent End | | Atsushi MUROGA | 2006 | 4:36 Min. | Nippon Digital | 2008 |
| Yakuza's Delivery | | Noriaki SUGIHARA | 2006 | 9:38 Min. | Nippon Digital | 2008 |
| Xylophone | | Seiichi HISHIKAWA | 2011 | 3:05 Min. | Nippon Visions | 2012 |
| X | | Toru TAKEMITSU, Shuntaro TAKINAWA | 1960 | 15 Min. | Nippon Retro | 2007 |
| WXIII Patlabor The Movie 3 | | Fumihiko TAKAYAMA | 2002 | 100 Min. | Nippon Digital | 2002 |
| Worst Contact | | Gen SEKIGUCHI | 2001 | Min. | Nippon Digital | 2002 |
| World's End / Girl Friend | | Shiori KAZAMA | 2004 | 112 Min. | Nippon Cinema | 2005 |
| World Order: Last Dance | | Genki SUDO | 2013 | 4 Min. | Nippon Visions | 2014 |
| World | | Wakako SUGIMOTO | 2007 | 4:11 Min. | Nippon Digital | 2009 |
| Woodblock Print Katsuben – Princess Version | | Hirono YAMADA | 2004 | 4 Min. | Nippon Digital | 2009 |
| Wonderland In The Negative | | Daiki UEDA | 2003 | 60 Min. | Nippon Digital | 2004 |
| Wonderful Paradise | 脳天パラダイス | Masashi YAMAMOTO | 2020 | 97 Min. | Nippon Cinema | 2021 |
| Women Are Born Twice | 女は二度生まれる | Yuzo KAWASHIMA | 1961 | 99 Min. | Nippon Retro | 2019 |
| Woman On The Whale | | Mitsuhiro ONO | 2006 | 7 Min. | Nippon Retro | 2007 |
